Insertion junction: CLIP2.005612_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005612
Chromosome:chromosome 16
Location:1169302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650400 CPL20 Hypothetical zinc-dependent DNA-binding protein; (1 of 1) IPR000104//IPR006734 - Antifreeze protein, type I // Protein of unknown function DUF597 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCCCTAGACGAAGCCACAGCGACACACGCATCTACACAAAACCCAAC
Internal bar code:CAGTGGCGCGTTTAAGGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2924
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGTGAGCATTGTGCCT
Suggested primer 2:AATGTATGTCTGTGCCGGCA