Insertion junction: CLIP2.005614_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005614
Chromosome:chromosome 10
Location:2249951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433900 (1 of 2) K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGCCGTCCGAGTGCAGCGCCCAGCCGCAGCTGGTGTCGCCCACACA
Internal bar code:CTGAAGTTCCTTTGTGGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5745
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTTCTACATCGCGGCAGC
Suggested primer 2:AGGTACACAAGCTCACACGG