Insertion junction: CLIP2.005616_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005616
Chromosome:chromosome 12
Location:8507464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549500 (1 of 2) 1.5.4.1 - Pyrimidodiazepine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGTAGTGCACCGGGCACTGGGCGTCCACCCTGCGGGCGGCGGAGCGG
Internal bar code:ACCCCGAATTCTTGACCTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2470
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGGTTTATGCGCGCATA
Suggested primer 2:CCGCACTCTCCATGTCAAGT