Insertion junction: CLIP2.005620_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005620
Chromosome:chromosome 3
Location:1562969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152250 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTTCGGTTACACCGGTACAGGCAGGGTTGGCACGCGTGCCACCCTA
Internal bar code:GGTGCAGGCACGAATTTGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGAGTCGCACGAGGCTAC
Suggested primer 2:CGCATGCACTGTGGCTTATC