Insertion junction: CLIP2.005623_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005623
Chromosome:chromosome 2
Location:3473253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098950 SYP72 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAACTCCCGAAGACTTCCCTATGCAAATGCGCGCGCTGAACACATTT
Internal bar code:CAGCCTTCATAATGCCTGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:6094
LEAP-Seq percent confirming:89.5522
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTGTTCCAAACGTGCCC
Suggested primer 2:AAACAAAGTGCCAGACCCCA