Insertion junction: CLIP2.005623_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005623
Chromosome:chromosome 12
Location:8568523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGTAACTCCGTCGCGTCATTGGGCGGGCTTTCGTTTCGTTTTTTAACA
Internal bar code:TATGGGTGCGGCACCGTAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2590
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGTTGTTCACGCACTT
Suggested primer 2:ACTTAGTGGGCGGGATTTGG