Insertion junction: CLIP2.005625_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005625
Chromosome:chromosome 3
Location:3793284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169700 TMG11 tRNA (guanosine-2'-O)-methyltransferase; (1 of 1) PTHR12029:SF45 - RRNA METHYLASE-LIKE PROTEIN 5'UTR
Cre03.g169750 FAP371 Flagellar Associated Protein 371 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGTCTATCCGGAACTGCCAAAACTTGACTGCACTGTCACGCTGTGG
Internal bar code:ACTGCGTGAAATCTCCGCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:588
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTCTTGGAACACCGTGC
Suggested primer 2:ACTCGCGCTGAATTCTGGAA