Insertion junction: CLIP2.005625_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005625
Chromosome:chromosome 3
Location:3793285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169700 TMG11 tRNA (guanosine-2'-O)-methyltransferase; (1 of 1) PTHR12029:SF45 - RRNA METHYLASE-LIKE PROTEIN 5'UTR
Cre03.g169750 FAP371 Flagellar Associated Protein 371 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGTCACAGCTGGTAGTCTTGACTTGCTCCTGCTCCTGGCTTTTGACC
Internal bar code:ACTGCGTGAAATCTCCGCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2819
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGCGCTGAATTCTGGAA
Suggested primer 2:GTTGTCTTGGAACACCGTGC