Insertion junction: CLIP2.005629_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005629
Chromosome:chromosome 16
Location:7851361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689087 RTN1 (1 of 1) PTHR10994//PTHR10994:SF71 - RETICULON // RETICULON-LIKE PROTEIN B3; related to reticulon intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGACTTGCCCTGTGGGTCCGCCGCGCTGCCCGTCCCGCAGGTGGACT
Internal bar code:AATAGTGGGTAATTCTCCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:716
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGAGGTGGCATTCATGAA
Suggested primer 2:CACGATGCTCGCTTGACATG