Insertion junction: CLIP2.005633_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005633
Chromosome:chromosome 12
Location:8431001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550152 (1 of 1) PF12253 - Chromatin assembly factor 1 subunit A (CAF1A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGTGTAGGCTGGGTTGGAATTGGCTTGGGGCAGTTGCAAGGGACGAA
Internal bar code:AGTGGTTTTGCGTAATCTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3431
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGATGTTTGGCATGCGG
Suggested primer 2:CCCTACCTCACCCCCTACTC