Insertion junction: CLIP2.005634_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005634
Chromosome:chromosome 16
Location:5408674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682900 CLPR2 (1 of 1) PTHR10381//PTHR10381:SF15 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC; inactive subunit of chloroplast ClpP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCAGAGGACCAAACTCTGGCCTGCTCGCCCCTCCCTTCATGCCTGGC
Internal bar code:GGTCGGGGGGACATATCGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAACAATCAGCCCGGCCA
Suggested primer 2:CAAACGTGGTGGGCAAGAAG