Insertion junction: CLIP2.005635_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005635
Chromosome:chromosome 16
Location:3217011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTTCAGCAGGTAGCCCAGGCTGTGCAGCCGCCCCGCCAGCGACTTGG
Internal bar code:AATGTCACCCCAATGAGAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1416
LEAP-Seq percent confirming:84.2857
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTGCGCATCAAAACCCT
Suggested primer 2:TCCAAGGGATTCGCAGCAAT