Insertion junction: CLIP2.005643_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005643
Chromosome:chromosome 8
Location:898200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361650 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGAGCATGCGGAACACGCGCGGCCGGATGAGCGGGTGCGTCATGAT
Internal bar code:TTAAAAATTAGGCAAACCTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1916
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTAACATGTTCCTTCG
Suggested primer 2:GGCAAGGGGTCAGGAATGAA