Insertion junction: CLIP2.005650_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005650
Chromosome:chromosome 2
Location:3474553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099000 SYP71 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCTTCTTGACCTTCTTCTCCAGCGCCTGTACTGCCTCTGTCAACAG
Internal bar code:CGCCAGTTATATAAAAGCCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3186
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCAAGACCAGGGGCAAT
Suggested primer 2:TTCTTGCCGTATGACCACCC