Insertion junction: CLIP2.005660_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005660
Chromosome:chromosome 2
Location:1767146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086550 CGL122 (1 of 4) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN); predicted Fe-S-cluster redox enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGAGGCCAGCGGCTTCACAGCGACCCAATTATACCCACTATCTACACA
Internal bar code:CTTTCCTCATGGAATTGGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3967
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGTGGGTTTGAAACAGC
Suggested primer 2:CACCCGACTTTCTCCACGAA