Insertion junction: CLIP2.005664_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005664
Chromosome:chromosome 3
Location:1562848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152250 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGGAAAGCGGGGGCAGGAAGGTGGCGGGCGGCACGATGGGTAAGCG
Internal bar code:TCTCAAAACGGATGTGTGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCTGTCGCATGTTGGCT
Suggested primer 2:AGCACTAGTGGCTGTTGGAC