Insertion junction: CLIP2.005667_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005667
Chromosome:chromosome 2
Location:4384670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105550 (1 of 1) IPR000104//IPR003008 - Antifreeze protein, type I // Tubulin/FtsZ, GTPase domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGGAGAGAACGCACAAAGACTGGCTCAGAAGTCATGCTGCCGACATG
Internal bar code:CCGGATATTGTTTATTACGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1153
LEAP-Seq percent confirming:51.8519
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTGTCAAAGTTGGAAC
Suggested primer 2:CTCGCATACCTCGGTCTTCC