Insertion junction: CLIP2.005667_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005667
Chromosome:chromosome 10
Location:3547890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g445100 CGL50 (1 of 1) PTHR13068:SF26 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATCGTATGACGGCAAGGGCCGAAGCGCGCGTGATGGAGGCCAGGTTT
Internal bar code:ATTGTTTGATCCGTTCTGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2565
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAACACTGTAGCCCAGC
Suggested primer 2:CTGTTGTTTGTGGTCCGCTG