Insertion junction: CLIP2.005667_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005667
Chromosome:chromosome 10
Location:3547905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g445100 CGL50 (1 of 1) PTHR13068:SF26 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACTGGGCTGCAGCTGCTGGGTGGGCGCCCTCCACCTACCTCACATGGT
Internal bar code:TGGTTCTTAGTAGAATTGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGTTTGTGGTCCGCTG
Suggested primer 2:AGTCAACACTGTAGCCCAGC