Insertion junction: CLIP2.005685_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005685
Chromosome:chromosome 2
Location:3367633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098200 CGL103,PRT1 (1 of 1) PF00569//PF13920 - Zinc finger, ZZ type (ZZ) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATCCACACAACCGCAACCCACCTGGTTGAAGCGGCCCCGGCCGGAGG
Internal bar code:TGGTATTTGAATCGCCCTCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2478
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTGCTTCACCTGGTAC
Suggested primer 2:CCGTTCTCATCGCTCTCCTC