Insertion junction: CLIP2.005687_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005687
Chromosome:chromosome 12
Location:9200296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543100 (1 of 1) K03256 - tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit (TRM6, GCD10) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGAGGTCACCGCCGACGGCAAGAGCTTGCAGCGGGTTCTCCTGTGAG
Internal bar code:ATGCGTATCTAAGCTTACAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:890
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACCTCCGAGATCATGC
Suggested primer 2:AGGGCAGGTTGCTGTAAGAC