Insertion junction: CLIP2.005687_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005687
Chromosome:chromosome 12
Location:9200305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543100 (1 of 1) K03256 - tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit (TRM6, GCD10) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGAACAGCGCGCCGAAGGGGGCCCCGATGAGGGGTGCAGTCGACAC
Internal bar code:ATGCGTATCTAAGCTTACAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2228
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCAGGTTGCTGTAAGAC
Suggested primer 2:CCTCACCTCCGAGATCATGC