Insertion junction: CLIP2.005692_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005692
Chromosome:chromosome 2
Location:2087684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088850 RFS2 Riboflavin synthase; (1 of 1) 2.5.1.78 - 6,7-dimethyl-8-ribityllumazine synthase / Lumazine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGCCGGAGCGGGCGTCATGTAGAGCCACTGGTGTGAAAATCCTGAC
Internal bar code:TTAGTGTTTCAGATGAATGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1039
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAATTCCTGCCAGACAT
Suggested primer 2:GCGCCATTGTCATCATGCAT