Insertion junction: CLIP2.005694_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005694
Chromosome:chromosome 4
Location:529141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217932 PRPL35 Chloroplast ribosomal protein L35; (1 of 1) K02916 - large subunit ribosomal protein L35 (RP-L35, MRPL35, rpmI) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGTGATTTCCACGTGCTGCTGGCAGATCTGGCAGGTTGGTGTGCTT
Internal bar code:AACAATCGAAGGTTCGGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2711
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TATCCAGGACGTTATGCGCC
Suggested primer 2:ATAAAGGAGCTCGGGAGGGT