Insertion junction: CLIP2.005697_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005697
Chromosome:chromosome 11
Location:773331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467631 CGL90 Zinc carboxypeptidase; Conserved in green lineage; (1 of 1) 3.4.17.15 - Carboxypeptidase A2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTTCTGCGCTCAATGTGGGGAGGATATATTCAAACGTTCAACGTCCC
Internal bar code:GTCGTTGATATTGGCGAGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:694
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGGTGTGAGGACCGTAT
Suggested primer 2:AATGTGTGCGACGTACCAGT