Insertion junction: CLIP2.005698_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005698
Chromosome:chromosome 12
Location:8436558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550152 (1 of 1) PF12253 - Chromatin assembly factor 1 subunit A (CAF1A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAACTCGAGCTTGCCCGTTGTTCAAACTTAGCCGTTGCTGCAACGCA
Internal bar code:GTAATGGACCCGTTACATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAGAGAGAGAGGGAGGC
Suggested primer 2:CTCGTGGACTTGCTGTCTGT