Insertion junction: CLIP2.005701_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005701
Chromosome:chromosome 16
Location:5531519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682100 TDR1 (1 of 1) 1.1.1.206//1.1.1.236 - Tropinone reductase I / Tropinone reductase // Tropinone reductase II / Tropinone reductase; Tropine dehydrogenase/reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCTGCCTGCCTGCCTGCCTGCCTGCCCCTCACCCACCTCCTCCGAG
Internal bar code:AGACCTCAACCTTCAATTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTGATAGGGCTGTGTG
Suggested primer 2:TGCAGCCCAGGTTTTCGTAT