Insertion junction: CLIP2.005705_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005705
Chromosome:chromosome 3
Location:8235035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAAGGGAACATTGCCGGACAGGTTGCCAGAGTGCCCAGCGGATGCTA
Internal bar code:TGCCGGTCGTCTCATTTTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACGTTGACAGTCACAC
Suggested primer 2:ACTGCTTGGAATCCCCATGG