Insertion junction: CLIP2.005713_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005713
Chromosome:chromosome 10
Location:1714867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429880 CGL156 DNA binding protein; (1 of 1) IPR001606//IPR001965//IPR003754//IPR011011//IPR019787 - ARID DNA-binding domain // Zinc finger, PHD-type // Tetrapyrrole biosynthesis, uroporphyrinogen III synthase // Zinc finger, FYVE/PHD-type // Zinc finger, PHD-finger intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTATGTGCGTGTGTGCCTCGAGGGGCTTGCGAAATGTCTTTCTGGT
Internal bar code:GGGGAATATGTCACCCGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:17.3913
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGTGGTAGAATGCATG
Suggested primer 2:AGACGTTTGGTTGGTTGGGT