Insertion junction: CLIP2.005719_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005719
Chromosome:chromosome 7
Location:4966240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347000 (1 of 6) IPR001245//IPR011009 - Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGGGAGGGGTACCTATGCCATGTCTGTGCGCGTGGCGCACATATGG
Internal bar code:CGCCCAAAGAATTGAGGTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1357
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCATGAAACACACGCACA
Suggested primer 2:GAGTCTGTCACGGACGGTTT