Insertion junction: CLIP2.005721_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005721
Chromosome:chromosome 12
Location:2008056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510750 GEX6 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGTCCGTGCAGTTCCCGGTGCCGCCCGTCTTCCGGCCCTTCAAGTTA
Internal bar code:TTGTGAAACTATTACCGCAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3521
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTTTGCAGCAAAGTCG
Suggested primer 2:GGTGGGTGTTTCTCTCTGGG