Insertion junction: CLIP2.005722_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005722
Chromosome:chromosome 16
Location:3217035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCATCCTCCTCGCCCTCCAGCTCGTTCAGCAGGTAGCCCAGGCTGT
Internal bar code:GTGAGGCCTCTAACACCACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1461
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTGCGCATCAAAACCCT
Suggested primer 2:TCCAAGGGATTCGCAGCAAT