Insertion junction: CLIP2.005725_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005725
Chromosome:chromosome 1
Location:120435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000900 CPLD20 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAAGCATGCGCTTGTTGTTGCGAGCGAGGGCCCTCCATGCAAGTGCC
Internal bar code:AATGCCGTCCCGAAAGTTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3050
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCGATAAGGATGACGTC
Suggested primer 2:GTATAGGCCCGGAGACTTGC