Insertion junction: CLIP2.005728_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005728
Chromosome:chromosome 6
Location:1916224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264300 PRPS15 (1 of 2) IPR005290 - Ribosomal protein S15, bacterial-type; Chloroplast ribosomal protein S15 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAATGCCACAAGTTCCCGAGCCCAGCCCACCCAGTTCGCGTTCCCATCT
Internal bar code:ATAAATCTTTGTAACCATTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:498
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTGCCCGATTGAGCTAT
Suggested primer 2:GCACAAGTTCTGCACTGTGG