Insertion junction: CLIP2.005734_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005734
Chromosome:chromosome 3
Location:4108363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172500 PTO2,PTOX2 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGGAAAGGCTAAAGTCGACAGACAGCGCTGGGTCCCGTGAATGAAGC
Internal bar code:TGGTTTAAAAACCTTTAGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCTCTGACATGACACA
Suggested primer 2:ATGGCCGACAGCTACGAAAA