Insertion junction: CLIP2.005741_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005741
Chromosome:chromosome 12
Location:5238888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527600 (1 of 1) K12865 - polyglutamine-binding protein 1 (PQBP1, NPW38) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCGTGCCGCCTGCGCCGTCAGGCACCCGCTGCCCGCAGCCCCTGCC
Internal bar code:CTATCGTGAGGGTCCAGTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCGACTAGTGGATCCC
Suggested primer 2:TAGAAGTAGGAGCGCGCATG