Insertion junction: CLIP2.005741_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005741
Chromosome:chromosome 12
Location:5238891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527600 (1 of 1) K12865 - polyglutamine-binding protein 1 (PQBP1, NPW38) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGCGCCGGTGGCTGGGCGGCTGCTTGAATGCGCCGCGATGGTGAGGG
Internal bar code:TCTACATAAAAGCTTTGATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1870
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAAGTAGGAGCGCGCATG
Suggested primer 2:CATGGCGACTAGTGGATCCC