Insertion junction: CLIP2.005743_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005743
Chromosome:chromosome 3
Location:2099609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156500 (1 of 1) IPR000104//IPR016084 - Antifreeze protein, type I // Haem oxygenase-like, multi-helical CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACCTATGAAGGGTCCGCGGCAGCGGCGGCCGCGGCGGCGGCGCTCGC
Internal bar code:TGAAACCTTATAGGCTTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAGGGCTACACACACAG
Suggested primer 2:AAGCCATGTCACCACCTAGC