Insertion junction: CLIP2.005747_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005747
Chromosome:chromosome 1
Location:2412354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013801 SXD1,TCY1 (1 of 1) 5.5.1.24 - Tocopherol cyclase; Tocopherol cyclase 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTTCCGCAGCCTGGTGACGTTGCCGCTGGACGTGGCGGGGCTGGGAC
Internal bar code:CCTTAGCAAGACAATCGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5510
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGACTGCACAGAAGAT
Suggested primer 2:CACCACACTGCCTAACCACT