Insertion junction: CLIP2.005750_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005750
Chromosome:chromosome 4
Location:385318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217911 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCGAGGCCCCGGACGCGGAGCGGCATCGGAGAGGGGTGCGGGACGA
Internal bar code:AACTTATCTACTGTATTATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:935
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGGATTCAATCGCAACA
Suggested primer 2:CTGGCCAAACTGTTGAACCG