Insertion junction: CLIP2.005750_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005750
Chromosome:chromosome 16
Location:3006378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663876 (1 of 7) PF00415//PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Regulator of chromosome condensation (RCC1) repeat (RCC1_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTCGGCCTCAACACAAGGGGCCAGCTCGGACACTCGGCCGAGGCCGA
Internal bar code:GAGCGGCTTCATTACTGATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGCAGCCAAACGTGTA
Suggested primer 2:AACACCAGAATACCCAGCGG