Insertion junction: CLIP2.005762_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005762
Chromosome:chromosome 6
Location:1608338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261500 CPLD58 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR11260:SF136 - THIOREDOXIN FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCGGCAGCTGTGCTGCAGAAGAATGCGGGGGCTGGAGCATCCTGCC
Internal bar code:GAGATCATTTGGATACACTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2265
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGCGTGTGTGGTTAC
Suggested primer 2:GAAGGGGCTCATCTCGTAGC