Insertion junction: CLIP2.005767_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005767
Chromosome:chromosome 3
Location:6835088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197450 (1 of 1) PTHR10799:SF676 - WINGED HELIX DNA-BINDING DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCAAGTTCGAGGGCAAGGACCTTTCAGGTGCGCTGGTGTTACAGAA
Internal bar code:TCTAAGATTCGGTTGTTGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGAGACTATAGCGTGTC
Suggested primer 2:ATGACACCCCGTGATGACAC