Insertion junction: CLIP2.005771_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005771
Chromosome:chromosome 17
Location:2875751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718900 FAP88 Flagellar Associated Protein 88; (1 of 1) PTHR23237//PTHR23237:SF6 - NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 // H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGTGGATGTGGGCGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTG
Internal bar code:GTTGCACCAGGACTGGGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:51.7241
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGAGTGAAACGGGTGGC
Suggested primer 2:GCCAGTGGTACTAACGGCTT