Insertion junction: CLIP2.005771_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005771
Chromosome:chromosome 17
Location:2875754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718900 FAP88 Flagellar Associated Protein 88; (1 of 1) PTHR23237//PTHR23237:SF6 - NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 // H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACCCTGGGTAGCCGCGCGCACCTTCTGCCCGCTGGCGCTGCCGGAG
Internal bar code:GTTGCACCAGGACTGGGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:898
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTGGTACTAACGGCTT
Suggested primer 2:GTTTGAGTGAAACGGGTGGC