Insertion junction: CLIP2.005776_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005776
Chromosome:chromosome 3
Location:4949492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTCTAGAGATTACTGCTAGTAAGGACGCCAGCAGCACCACCATACTG
Internal bar code:GGGTACTTCAAGTGCTGGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3449
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GACTATGCTCTAACGCCCCC
Suggested primer 2:CACACACACTTGGGCTTTCG