Insertion junction: CLIP2.005778_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005778
Chromosome:chromosome 12
Location:4557340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521450 CLPP2 (1 of 1) PTHR10381//PTHR10381:SF11 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL-RELATED; peptidase subunit of mitochondrial ClpXP protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTGAGGATTTCGTCGATCAGCCCCCAGTCCTTGGCCTCCTGCGCGCT
Internal bar code:TGGCGGTTACGAGTTCACATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1934
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGCAACTCACTGCCAC
Suggested primer 2:ACGACTCAGCTCACCATTGG