Insertion junction: CLIP2.005785_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005785
Chromosome:chromosome 12
Location:3628335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513300 CGL23 Conserved in the Green Lineage 3'UTR
Cre12.g513350 (1 of 37) IPR009030 - Insulin-like growth factor binding protein, N-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTGCATAGGACACGCTGGAGCACAGCCCAGCAGCAGTGGTCGTCTGT
Internal bar code:TAGGTAAGTGTCCCGGCCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1406
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGGCACTCATAGCATAGT
Suggested primer 2:ACGACTTGCTCAGTTCCCTG