Insertion junction: CLIP2.005787_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005787
Chromosome:chromosome 12
Location:3626198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513300 CGL23 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGATGCGGCACGGGTCACTACCAGACAGTGTCATGGACTTGCCTACC
Internal bar code:TGAAGAGGGCCGCTGTTTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:29.0323
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCCTGACCTAATTTGCA
Suggested primer 2:GAGGTACATAGTCCTGGCGC