Insertion junction: CLIP2.005794_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005794
Chromosome:chromosome 17
Location:3118331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720550 (1 of 1) PTHR34202:SF1 - UPF0548 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCACCTACGGCCCTGGCCATTACTCAAAAAAAGTGATGGTCCGTCCCG
Internal bar code:TGTGGCGTCACCCATAGCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1213
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGACTCAGATGCACGCCAAT
Suggested primer 2:ATTCCACCTCCTCCGCAAAG